Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876249.1_cds_XP_016436041.1_31943
CDS Infomation

[gene=LOC107762214] [db_xref=GeneID:107762214] [protein=ubiquitin carboxyl-terminal hydrolase 22-like] [protein_id=XP_016436041.1] [location=complement(join(6860..7623,7879..7997,8416..9191))] [gbkey=CDS]
Sequence

ATGTGCTCAAGTAACTCTTTATATATAAATCCAAAGCCCTGTAAGCATCTTGCAGATTAC
AAGGTGAAAAATGGTATGAGTGGGTATAGTTTGATCCAAGAATGTTTTAAGACAACCCCA
TATGGTAGGACCACATTAGAAATATCCAAATCAGAGCTACCTAGATGTAGTATTTGTAGT
GGACATGAGGGTAGATTTTACATGTGTTTGATCTGTTCATCAGTGTTATGTTGTTTGTCA
CCTGAATCAAACCATGCCCTTTTGCATAGTCAGTGTAAAGCTGGGCATGAGATTTCAGTA
GACATGGAAAGGGCTGAGCTTTATTGCTCAGTGTGTTGTGATCAGGTGTATGATCCTGAT
TTTGATAAGGTTGTGATGTGTAAACACATAATGGGGTTTCCTAGAACAGAAATTGGGGTT
GTGGAGAGTGAGTTGAGGTTGAGCAAGAGGAGAAGGTTGAGTTTTGGGATGGATTTAGAT
TCAAAGAATATGAAGACGTTGTTTTTAAGGAGGGATCAGAAGTCGAAATCATGTTTTCCT
TTAGTATTAAGGGGTTTGAACAATTTGGGGAATACTTGTTTCATGAACTCTGTGTTGCAA
GTGTTACTTCATGCACCCCCTTTGAGAAATTACTTCCTTAGCGATAGGCATAACCGAGAT
ATTTGCAGAAAGATGTCGTCGGATCGGTTGTGCCTGCCTTGTGATATTGACCTTATCTTC
TCAGCTGTCTTTTCTGGTGATCGGACCCCTTATAGTCCAGCTCGGTTTCTTTACAGTTGG
TGGCAGCATTCAGAAAATCTTGCTACCTACGAGCAGCAGGATGCTCATGAGTTCTTCATT
TCAGTTATGGACAGGATCCATGATAAAGAGGGGAAAGCTAGTTTGGCAACCAAAGATAAT
GGAGATTGCCAGTGTATTGCTCATAGGACTTTCTATGGGCTCTTGAGATCTGATGTCACA
TGTACATCGTGCGGATTCACTTCAACAACTCATGATCCTTGTATGGACATTTCTCTTGAC
TTGAATAGCTGCAACTCCAGCCCAAAGGATTTTGCTAATAAGTCGAGTAAGCCAAATGAA
TCTCTTGTAGGTTGCTTGGACCTCTTCACACGACCAGAAAAGTTGGGATCTGATCAGAAA
CTGTATTGTGAAAATTGTCAGGAAAAGCAAGATGCATTGAAACAAATGTCCATCAAGAAG
CTTCCGCTGGTGCTATCTTTTCATATAAAACGCTTTGAACATTCTCCCACCCGAAAAATG
TCCAGAAAGATTGACCGCCACCTGCAATTTCCTTTTTCTTTAGACATGAAACCATATTTA
TCATCTTCAATTGTACGAAAGAGATACGGGAACAGAATCTTTTCATTCGACGGTGATGAA
TCAGATATTTCTACGGAATTTGAAATTTTCGCTGTGGTCACACATTCAGGGATGTTAGAA
TCAGGTCACTATGTGACTTATTTGCGTTTGAGAAACCAATGGTACAAATGCGACGATGCA
TGGATTACTGAAGTCGATGAAGAAGTTGTCAGGGCCTCACAATGCTATCTGATGTACTAT
GTACAAAAGATGCTTTACCACAAGAGTTGTGAGGATGTTAGCTGCCAACCAATGTCACTT
CGAGCTGACACATTTGTTCCTATAGCTGGTTGCTGCTAG

Peptide Sequence

PEP ID

XP_016436041.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nicotiana tabacum]
Sequence

MCSSNSLYINPKPCKHLADYKVKNGMSGYSLIQECFKTTPYGRTTLEISKSELPRCSICS
GHEGRFYMCLICSSVLCCLSPESNHALLHSQCKAGHEISVDMERAELYCSVCCDQVYDPD
FDKVVMCKHIMGFPRTEIGVVESELRLSKRRRLSFGMDLDSKNMKTLFLRRDQKSKSCFP
LVLRGLNNLGNTCFMNSVLQVLLHAPPLRNYFLSDRHNRDICRKMSSDRLCLPCDIDLIF
SAVFSGDRTPYSPARFLYSWWQHSENLATYEQQDAHEFFISVMDRIHDKEGKASLATKDN
GDCQCIAHRTFYGLLRSDVTCTSCGFTSTTHDPCMDISLDLNSCNSSPKDFANKSSKPNE
SLVGCLDLFTRPEKLGSDQKLYCENCQEKQDALKQMSIKKLPLVLSFHIKRFEHSPTRKM
SRKIDRHLQFPFSLDMKPYLSSSIVRKRYGNRIFSFDGDESDISTEFEIFAVVTHSGMLE
SGHYVTYLRLRNQWYKCDDAWITEVDEEVVRASQCYLMYYVQKMLYHKSCEDVSCQPMSL
RADTFVPIAGCC

Transcript Sequence

Gene sequence data has not been registered.